CSIR - Centre for Cellular & Molecular Biology
Council of Scientific and Industrial Research
Ministry of Science & Technology, Govt. of India
Senior Scientist
Email: sriram@ccmb.res.in
Phone: +91-040-27192629
Research Interests:
Fluctuations in nutrient availability is one of the most common challenges faced by microbes in their natural environment and within the host environment upon infection. In response to this challenge, microbes reversibly transition to specialized cell states that allow them to survive and persist in these dynamic environments. Our group aims to understand how conserved metabolic events orchestrate these cell state transitions specifically in the context of microbial community development and host pathogenesis. We will employ simple fungal models like Baker's yeast as well as pathogenic fungal models (primarily Cryptococcus neoformans) and use multidisciplinary approaches combining microbial genetics, biochemical and cell-biology based approaches in conjunction with microscopy, transcriptomics, pertinent mass-spectrometry and cell culture/animal infection models to address these questions.
Selected Publications
Sriram Varahan* and Sunil Laxman*. (2021). Bend or break: how biochemically versatile molecules enable metabolic division of labor in clonal microbial communities. GENETICS Oct 2;219(2):iyab109. doi: 10.1093/genetics/iyab109. (* Co-corresponding authors)
Sriram Varahan, Vaibhhav Sinha, Adhish Walvekar, Sandeep Krishna and Sunil Laxman. (2020). Resource-plasticity driven carbon-nitrogen resource budgeting enables specialization and division of labour in a clonal community. eLife Sep 2;9:e57609. doi: 10.7554/eLife.57609.
Sriram Varahan, Adhish Walvekar, Vaibhhav Sinha, Sandeep Krishna and Sunil Laxman. (2019). Metabolic constraints drive self-organization of specialized cell groups. eLife Jun 26;8:e46735. doi: 10.7554/eLife.46735.
Sriram Varahan, Nathan Harms, John Tomich, Michael Gilmore and Lynn Hancock. (2014). An ABC transporter is required for secretion of peptide sex pheromones in Enterococcus faecalis. mBio. 5(5):e01726-14. doi:10.1128/mBio.01726-14.
Sriram Varahan, Vijayalakshmi Iyer, William Moore and Lynn Hancock. (2013). Eep confers lysozyme resistance to Enterococcus faecalis via the activation of the ECF sigma factor, SigV. Journal of Bacteriology. Jul;195(14):3125-34. doi:10.1128/JB.00291-13.
Education & Experience
P.G: | B-Tech. Biotechnology ; Anna University ; 2010 |
Ph.D: | Role of Enterococcal Membrane Proteins in Cell-Cell Communication and Stress Adaptation ; University of Kansas, USA ; 2014 |
Post.Doc: | Institute for Stem Cell Science and Regenerative Medicine (InStem), Bengaluru, India ; 2015-2021 ; |
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Title | Journal | Year |
---|---|---|
The deubiquitinase Ubp3/Usp10 constrains glucose-mediated mitochondrial repression via phosphate budgeting | Elife. Sep 26:12:RP90293. doi: 10.7554/eLife.90293. | 2024 |
Enterococcus faecalis | Trends in Microbiology. 32(9):925-926. doi: 10.1016/j.tim.2024.04.010. | 2024 |
Unity in Diversity: Interkingdom Polymicrobial Biofilms in Disease | Multispecies Biofilms: Technologically Advanced Methods to Study Microbial Communities | 2023 |
Bend or break: how biochemically versatile molecules enable metabolic division of labor in clonal microbial communities | Genetics. 219(2):iyab109. doi: 10.1093/genetics/iyab109. | 2021 |
SigV mediates lysozyme resistance in Enterococcus faecalis via RsiV and PgdA | Journal of Bacteriology. 203(20):e0025821. doi: 10.1128/JB.00258-21. | 2021 |
Influence of the alternate sigma factor RpoN on global gene expression and carbon catabolism in Enterococcus faecalis V583 | mBio. 12(3):e00380-21. doi: 10.1128/mBio.00380-21. | 2021 |
Resource plasticity driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community | Elife. Sep 2;9:e57609. doi: 10.7554/eLife.57609. | 2020 |
Involvement of chromosomally encoded homologs of the RRNPP protein family in Enterococcus faecalis biofilm formation and UTI pathogenesis | Journal of Bacteriology. Aug 10;202(17):e00063-20. doi: 10.1128/JB.00063-20. | 2020 |
Large-scale testing using Tapestry pooling | medRxiv. doi: https://doi.org/10.1101/2020.10.09.20209742. | 2020 |
Tapestry: A Single-Round Smart Pooling Technique for COVID-19 Testing | medRxiv. doi:https://doi.org/10. 1101/ 2020.04.23.20077727. | 2020 |
Metabolic constraints drive self-organization of specialized cell groups | Elife. Jun 26;8. pii: e46735. doi: 10.7554/eLife.46735. | 2019 |
To defend or not to defend: That?s the question | mSphere. 1(3):e00127-16. doi:10.1128/mSphere.00127-16. | 2016 |
Pheromone killing of multidrug resistant Enterococcus faecalis strain V583 by commensal strains | Proc Natl Acad Sci U S A. Jun 9;112(23):7273-8. | 2015 |
An ABC transporter is required for secretion of peptide sex pheromones in Enterococcus faecalis | mBio. 5(5):e01726-14. doi:10.1128/mBio.01726-14. | 2014 |
Drosophila host model reveals new Enterococcus faecalis quorum-sensing associated virulence factors | PLoS ONE. May;8(5):e64740.doi:10.1371/journal.pone.0064740. | 2013 |
Eep confers lysozyme resistance to Enterococcus faecalis via the activation of the ECF sigma factor, SigV | Journal of Bacteriology. Jul;195(14):3125-34. doi:10.1128/JB.00291-13. | 2013 |
Humoral Innate Immune Response and Disease | Clinical Immunology. Aug;144(2):142-58. doi: 10.1016/j.clim.2012.06.002. | 2012 |
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sriram@ccmb.res.in
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taraj@ccmb.res.in
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purushotham@ccmb.res.in
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dhrumi@ccmb.res.in
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pallavisp@ccmb.res.in
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siddhi@ccmb.res.in
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umamahto@ccmb.res.in
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sudharsan@ccmb.res.in
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nikitar@ccmb.res.in
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adishree@csirccmb.org
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ojasvi@csirccmb.org
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